GreatMod provides a versatile set of computational tools designed to address the complexity of biological systems, ranging from multi-scale integration to advanced stochastic simulations.

Core Capabilities

Integration with Flux Balance Analysis (FBA)

FBA Integration

Multi-Scale Modeling: Seamlessly couple dynamic Petri Net models with genome-scale metabolic networks. Analyze host-pathogen interfaces and metabolic reprogramming at multiple biological scales.

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Non-Markovian Stochastic Models

Non-Markovian Models

Beyond Memoryless Processes: Simulate stochastic events with general probability distributions. Capture complex temporal dynamics that standard Markovian models cannot represent.

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